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environmental DNA

monitoring biodiversity across Maryland

Researcher collecting a water sample for environmental DNA analysis in a stream
Environmental DNA (eDNA) allows detection of aquatic organisms from water samples alone—no netting, electrofishing, or visual surveys required. Aquatic organisms leave behind genetic traces that we collect and sequence to identify which species are present.

In collaboration with the Maryland Department of Natural Resources and the Maryland Biological Stream Survey (MBSS), we use eDNA to monitor biodiversity across Maryland's aquatic habitats, track rare and invasive species, and evaluate eDNA methods against conventional sampling.

Check out my publications page for updates on eDNA research.

brook trout genomics

statewide survey of genomic diversity in Maryland

Brook trout, the native char of Appalachian streams, subject of statewide genomic diversity survey in Maryland
Brook trout are the only native char of Appalachian streams and a sentinel species for cold, clean water. Across Maryland, populations are fragmented by dams, culverts, and warming temperatures—yet the genomic consequences of this fragmentation remain poorly characterized.

We are conducting a statewide survey of brook trout genomic diversity to assess population structure, estimate effective population sizes, and identify signatures of local adaptation. This work will help prioritize streams for conservation and inform restoration strategies across the Appalachian landscape.

Check out my publications page for updates on this research.

riverscape community genomics

comparative population genomics of stream fishes

River landscape used in riverscape community genomics research
Fish, like people, have populations structured across the landscape—but unlike humans, they don't draw maps. Riverscape community genomics uses SNP data from dozens of co-distributed stream fish species to identify common drivers of spatial genetic structure.

By modeling how species' ecological and life-history traits predict population structure, we aim to forecast genetic patterns for data-poor species and anticipate how fish 'countries' may shift under climate and land-use change.

Check out my publications page for more details, this Molecular Ecology article, and explore the parallel coordinates data.

landscape genomics
of white-tailed deer

applying genomics to epidemiology

White-tailed deer in natural habitat, subject of landscape genomics and chronic wasting disease research
White-tailed deer are one of North America's most recreationally valuable species and are prized for their lean and healthy meat. Despite the widespread extirpation of deer populations across the U.S. in the early twentieth century, subsequent management efforts helped deer rebound.

But now, populations are increasingly threatened by a fatal neurodegenerative disease known as chronic wasting disease (CWD; a prion disease similar to 'mad cow'). If we do not respond quickly and in earnest to the spread of this disease, then it may once again drive deer extirpation and have cascading effects on ecosystems, economies, and potentially human health.

To contain and mitigate the effects of CWD, we need to be able to forecast how it will spread. I work in collaboration with the Arkansas Game and Fish Commission (AGFC) and Arkansas Conservation and Molecular Ecology Lab (ACaMEL) to develop genomic-based tools for studying generational patterns of deer movement across the Arkansas landscape because this can help us predict the most likely routes for the future spread of CWD. These forecasts will help us put containment efforts in the right places.

Check out my publications page for more details, and see this AGFC Wildlife Magazine article.

stream fish ecology

exploring the factors that affect fish assemblage change in time and space

Researchers conducting fish surveys in Oklahoma streams as part of a state wildlife grant study


As a master’s student at the University of Oklahoma, working alongside Bill Matthews, I led a state wildlife grant project assessing fish species of greatest conservation need (SGCN) across 160+ stream reaches in southeastern Oklahoma.

This work revealed that headwater streams are critical for regional biodiversity—depauperate at individual sites but contributing high species turnover and drainage-level richness. Comparisons with surveys from 40 years earlier showed that spatial scale is paramount: individual sites fluctuate dramatically, while catchment-scale assemblages remain more stable through time.

Check out my publications page for more details.

conservation genomics
of a threatened fish

connectivity and adaptation

Neosho Madtom, a federally threatened catfish species native to the Neosho River system
In partnership with the Arkansas Conservation and Molecular Ecology Lab, Illinois Natural History Survey, Kansas Department of Wildlife & Parks, and US Fish & Wildlife Service I am studying the range-wide population genomics of the federally threatened Neosho Madtom.

This project delves into the conservation of the Neosho Madtom, a threatened catfish species in the Neosho River system. Employing a population genomic approach, our study aims to understand the genetic diversity, population boundaries, connectivity, and adaptation of the Neosho Madtom. Through extensive field sampling and genetic analysis, we've identified distinct genetic populations, assessed their viability, and explored environmental influences on their dispersal. Our objectives also include determining demographic trends and testing for local adaptation to inform effective conservation strategies for this unique species.

unique highland lineages
of smallmouth bass

distinct lineages of the interior highlands

Smallmouth bass, subject of population genetics and phylogeography research in the interior highlands
In collaboration with the Arkansas Conservation and Molecular Ecology Lab and Arkansas Game and Fish Commission, I am researching the regional population genetics and phylogeography of Smallmouth Bass.

The study aims to determine distinct lineages of the species across the interior highlands, where these lineages occur geographically, and where these lineages may be mixing. This information will help inform black bass management and help maintain evolutionarily significant units (ESUs) of diversity in the Ozarks.

fish diversity
in a contaminated drainage

Tar Creek Superfund site

Orange-colored contaminated water at the Tar Creek Superfund site in Oklahoma, where fish diversity is being monitored
Two world wars required raw materials for ammunition provided by lead mines near Picher, OK. Unfortunately, groundwater was contaminated due to these operations and eventually turned the surface water of Tar Creek into an orange disaster.

However, thanks to Robert Nairin and his team using environmental engineering to remediate parts of the watershed, the fish are returning to the once toxic waters. I sampled Tar Creek and surrounding areas while at the University of Oklahoma to assess re-establishment of fish populations. In parts of the watershed once utterly devoid of fish, the communities have recovered and harbor diversity similar to neighboring regions.

See the related story published in Sooner Magazine:
Fish Are Coming Back to Tar Creek

Yes, that is me in the orange soup. No, I did not like it any more than the fish.